The annotation rating supplies a measure that is heuristic of annotation content of the UniProtKB entry or proteome

The annotation rating supplies a measure that is heuristic of annotation content of the UniProtKB entry or proteome

This score can’t be utilized being a measure of the accuracy associated with the annotation even as we cannot define the ‘correct annotation’ for almost any offered protein.

– Experimental evidence at transcript level i

This means that the type of pr f that supports the protein. Observe that the ‘protein presence’ evidence will not give home elevators the correctness or accuracy associated with the sequence(s) shown.

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This section provides any helpful details about the protein, mostly biological knowledge.

Caution

Information which includes been created by the UniProtKB automatic annotation system, without handb k validation.

Automated assertion in accordance with rules i

The Gene Ontology (GO) project offers a set of hierarchical controlled vocabulary split up into 3 groups

GO – Molecular function i

  • antiporter task Source InterPro
  • xenobiotic transmembrane transporter activity Source InterPro

Protein family/group databases

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Transport Classification Database

This part provides information regarding the protein and gene name(s) and synonym(s) and about the organism that’s the way to obtain the protein sequence.

Names & Taxonomy i

This subsection of the Names and taxonomy section has an list that is exhaustive of names for the protein, from widely used to obsolete, allowing unambiguous recognition of a protein.

Automatic assertion in accordance with rules i

Automated assertion according to guidelines i

This subsection of the Names and taxonomy section indicates the name(s) of this gene(s) that rule for the protein sequence(s) described into the entry. Four distinct tokens occur ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.

Information which includes been imported from another database using procedures that are automatic.

Automatic assertion inferred from database entries i

This subsection of this true Names and taxonomy section provides info on the name(s) regarding the organism that’s the source of the protein sequence.

Automatic assertion inferred from database entries i

This subsection of the Names and taxonomy section shows the identifier that is unique by the N I to the source system associated with protein. This really is referred to as ‘taxonomic identifier’ or ‘taxid’.

This subsection of the Names and taxonomy section provides the taxonomic classification that is hierarchical associated with supply system. It lists the nodes as they appear top-down within the taxonomic tree, because of the more general grouping detailed first.

This area provides informative data on the location and the topology of this mature protein in the cell.

Subcellular location i Read More